Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | SAMN04488090_1657 | Not Available | Negative | 2120016 - 2120354 | 12227.4 |
| sugar phosphate isomerase/epimerase | SAMN04488090_1658 | Not Available | Negative | 2120428 - 2121336 | 33138.0 |
| cytochrome c | SAMN04488090_1659 | Not Available | Negative | 2121346 - 2124162 | 103052.0 |
| transcriptional regulator, arac family | SAMN04488090_1660 | Not Available | Negative | 2124482 - 2125408 | 35459.8 |
| acyl-coa dehydrogenase | SAMN04488090_1661 | Not Available | Negative | 2125570 - 2126712 | 41659.9 |
| hypothetical protein | SAMN04488090_1662 | Not Available | Positive | 2126957 - 2127334 | 14187.2 |
| hypothetical protein | SAMN04488090_1663 | Not Available | Negative | 2127331 - 2129277 | 68907.2 |
| hypothetical protein | SAMN04488090_1664 | Not Available | Negative | 2129317 - 2130039 | 28082.5 |
| hypothetical protein | SAMN04488090_1665 | Not Available | Negative | 2130110 - 2130517 | 15561.4 |
| lipoyl(octanoyl) transferase | SAMN04488090_1666 | Not Available | Negative | 2130514 - 2131242 | 27685.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
