Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04488090_1637 | Not Available | Negative | 2098861 - 2099943 | 40193.8 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN04488090_1638 | Not Available | Negative | 2099962 - 2101206 | 47620.2 |
| hypothetical protein | SAMN04488090_1639 | Not Available | Negative | 2101404 - 2101844 | 16155.3 |
| secretory lipase | SAMN04488090_1640 | Not Available | Positive | 2102432 - 2103637 | 43571.6 |
| hypothetical protein | SAMN04488090_1641 | Not Available | Negative | 2103700 - 2103858 | 5949.36 |
| hypothetical protein | SAMN04488090_1642 | Not Available | Negative | 2103915 - 2104334 | 15121.8 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN04488090_1643 | Not Available | Negative | 2104419 - 2106881 | 92484.5 |
| lsu ribosomal protein l31p | SAMN04488090_1644 | Not Available | Positive | 2107336 - 2107581 | 9411.11 |
| uncharacterized protein yjik | SAMN04488090_1645 | Not Available | Negative | 2107642 - 2108529 | 32830.2 |
| predicted metal-dependent phosphohydrolase, hd superfamily | SAMN04488090_1646 | Not Available | Positive | 2108552 - 2109817 | 47963.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
