Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-terminal processing peptidase-3. serine peptidase. merops family s41a | SAMN04488090_1617 | Not Available | Positive | 2071510 - 2073159 | 61939.1 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04488090_1618 | Not Available | Negative | 2073367 - 2074176 | 30385.8 |
| transcriptional regulator, arac family | SAMN04488090_1619 | Not Available | Positive | 2074305 - 2075159 | 33098.5 |
| Trna-pro | Not Available | Not Available | Positive | 2075219 - 2075291 | Not Available |
| sigma-70 region 2 | SAMN04488090_1621 | Not Available | Positive | 2075437 - 2076030 | 23479.2 |
| fecr family protein | SAMN04488090_1622 | Not Available | Positive | 2076088 - 2077164 | 39356.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_1623 | Not Available | Positive | 2077327 - 2080605 | 119865.0 |
| starch-binding associating with outer membrane | SAMN04488090_1624 | Not Available | Positive | 2080608 - 2082329 | 65058.4 |
| dinb superfamily protein | SAMN04488090_1625 | Not Available | Negative | 2082399 - 2082920 | 20095.9 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04488090_1626 | Not Available | Positive | 2083058 - 2084200 | 41006.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
