Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488090_1607 | Not Available | Negative | 2058755 - 2060218 | 52390.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_1608 | Not Available | Negative | 2060238 - 2063405 | 113801.0 |
| carboxypeptidase ss1. metallo peptidase. merops family m20d | SAMN04488090_1609 | Not Available | Positive | 2063841 - 2065166 | 47584.5 |
| short-chain dehydrogenase | SAMN04488090_1610 | Not Available | Negative | 2065150 - 2065959 | 29344.6 |
| hypothetical protein | SAMN04488090_1611 | Not Available | Negative | 2066207 - 2066548 | 12911.5 |
| two component transcriptional regulator, lyttr family | SAMN04488090_1612 | Not Available | Negative | 2066790 - 2067524 | 27883.1 |
| histidine kinase | SAMN04488090_1613 | Not Available | Negative | 2067599 - 2068678 | 41491.9 |
| signal transduction histidine kinase | SAMN04488090_1614 | Not Available | Negative | 2068873 - 2070243 | 51077.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488090_1615 | Not Available | Negative | 2070263 - 2070955 | 26348.2 |
| ribonuclease p protein component | SAMN04488090_1616 | Not Available | Positive | 2071086 - 2071463 | 14280.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
