Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488090_1587 | Not Available | Negative | 2026814 - 2027926 | 41660.6 |
| pp_01570 | SAMN04488090_1588 | Not Available | Positive | 2028052 - 2029185 | Not Available |
| ompa-ompf porin, oop family | SAMN04488090_1589 | Not Available | Positive | 2029333 - 2030811 | 54763.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_1590 | Not Available | Negative | 2031034 - 2033802 | 99339.5 |
| hypothetical protein | SAMN04488090_1591 | Not Available | Positive | 2033921 - 2034394 | 18203.8 |
| seryl-trna synthetase | SAMN04488090_1592 | Not Available | Negative | 2034273 - 2035535 | 47242.5 |
| aspartate kinase | SAMN04488090_1593 | Not Available | Negative | 2035604 - 2036962 | 50072.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN04488090_1594 | Not Available | Negative | 2036988 - 2037470 | 17272.5 |
| tetratricopeptide repeat-containing protein | SAMN04488090_1595 | Not Available | Negative | 2037563 - 2038255 | 24909.6 |
| arginine decarboxylase | SAMN04488090_1596 | Not Available | Negative | 2038610 - 2040079 | 56871.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
