Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1577 | Not Available | Negative | 2015047 - 2015415 | 13236.3 |
| peptidoglycan l-alanyl-d-glutamate endopeptidase cwlk | SAMN04488090_1578 | Not Available | Negative | 2015428 - 2015919 | 18158.7 |
| helix-turn-helix | SAMN04488090_1579 | Not Available | Positive | 2016219 - 2016947 | 27949.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_1580 | Not Available | Positive | 2017154 - 2019571 | 85239.4 |
| tetratricopeptide repeat-containing protein | SAMN04488090_1581 | Not Available | Negative | 2019607 - 2021403 | 70640.9 |
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN04488090_1582 | Not Available | Positive | 2021683 - 2024181 | 91011.6 |
| fic family protein | SAMN04488090_1583 | Not Available | Negative | 2024246 - 2025361 | 42024.5 |
| Trna-asn | Not Available | Not Available | Positive | 2025581 - 2025654 | Not Available |
| ph domain-containing protein | SAMN04488090_1585 | Not Available | Negative | 2025723 - 2026124 | 15630.5 |
| 16s rrna m(7)g-527 methyltransferase | SAMN04488090_1586 | Not Available | Negative | 2026177 - 2026803 | 23843.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
