Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l27p | SAMN04488090_1567 | Not Available | Negative | 2004771 - 2005037 | 9269.2 |
| lsu ribosomal protein l21p | SAMN04488090_1568 | Not Available | Negative | 2005106 - 2005417 | 11499.2 |
| prephenate dehydrogenase | SAMN04488090_1569 | Not Available | Negative | 2005526 - 2006365 | 30870.2 |
| aspartate/methionine/tyrosine aminotransferase | SAMN04488090_1570 | Not Available | Negative | 2006470 - 2007654 | 43779.4 |
| dna polymerase-3 subunit gamma/tau | SAMN04488090_1571 | Not Available | Positive | 2007978 - 2009717 | 64833.6 |
| 2-phosphosulfolactate phosphatase | SAMN04488090_1572 | Not Available | Positive | 2009814 - 2010518 | 25844.3 |
| hypothetical protein | SAMN04488090_1573 | Not Available | Positive | 2010536 - 2011471 | 34531.4 |
| tyrosinase | SAMN04488090_1574 | Not Available | Positive | 2012168 - 2013772 | 58084.4 |
| predicted metal-binding membrane protein | SAMN04488090_1575 | Not Available | Positive | 2013774 - 2014583 | 29423.6 |
| tyrosinase | SAMN04488090_1576 | Not Available | Positive | 2014576 - 2015013 | 15248.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
