Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1537 | Not Available | Positive | 1971774 - 1972157 | 13851.7 |
| uncharacterized conserved protein | SAMN04488090_1538 | Not Available | Positive | 1972161 - 1973468 | 47994.3 |
| hypothetical protein | SAMN04488090_1539 | Not Available | Positive | 1973472 - 1974029 | 20664.1 |
| hypothetical protein | SAMN04488090_1540 | Not Available | Positive | 1974032 - 1974448 | 15225.4 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN04488090_1541 | Not Available | Negative | 1974529 - 1975992 | 53570.4 |
| Trna-leu | Not Available | Not Available | Positive | 1976251 - 1976337 | Not Available |
| malate dehydrogenase (quinone) | SAMN04488090_1543 | Not Available | Negative | 1976536 - 1978047 | 55884.1 |
| dihydrolipoamide dehydrogenase | SAMN04488090_1544 | Not Available | Negative | 1978355 - 1979758 | 49781.1 |
| hypothetical protein | SAMN04488090_1545 | Not Available | Positive | 1979845 - 1980078 | 8852.97 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488090_1546 | Not Available | Negative | 1979989 - 1981020 | 38471.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
