Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | SAMN04488090_1517 | Not Available | Positive | 1952914 - 1954236 | 49165.5 |
| cysteine-rich domain-containing protein | SAMN04488090_1518 | Not Available | Positive | 1954249 - 1955034 | 28642.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488090_1519 | Not Available | Negative | 1955035 - 1955838 | 28991.7 |
| nicotinate-nucleotide adenylyltransferase | SAMN04488090_1520 | Not Available | Negative | 1955831 - 1956403 | 22332.8 |
| dna recombination protein rmuc | SAMN04488090_1521 | Not Available | Negative | 1956416 - 1957690 | 47945.3 |
| bacterial peptide chain release factor 1 (brf-1) | SAMN04488090_1522 | Not Available | Negative | 1957746 - 1958816 | 40160.5 |
| hypothetical protein | SAMN04488090_1523 | Not Available | Positive | 1959009 - 1959392 | 14340.7 |
| hypothetical protein | SAMN04488090_1524 | Not Available | Positive | 1959343 - 1959936 | 22117.8 |
| c-terminal processing peptidase-3. serine peptidase. merops family s41a | SAMN04488090_1525 | Not Available | Positive | 1959994 - 1961646 | 60866.5 |
| hypothetical protein | SAMN04488090_1526 | Not Available | Negative | 1961745 - 1962218 | 17755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
