Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease sbcc | SAMN04488090_1507 | Not Available | Positive | 1939929 - 1943030 | 118686.0 |
| methionyl aminopeptidase | SAMN04488090_1508 | Not Available | Positive | 1943042 - 1943806 | 27907.3 |
| hypothetical protein | SAMN04488090_1509 | Not Available | Negative | 1943890 - 1944369 | 18140.9 |
| hypothetical protein | SAMN04488090_1510 | Not Available | Negative | 1944471 - 1946819 | 86476.9 |
| l-threonylcarbamoyladenylate synthase | SAMN04488090_1511 | Not Available | Negative | 1947026 - 1947961 | 33489.3 |
| hypothetical protein | SAMN04488090_1512 | Not Available | Negative | 1948050 - 1948763 | 26722.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN04488090_1513 | Not Available | Negative | 1948873 - 1949316 | 16786.2 |
| putative lumazine-binding | SAMN04488090_1514 | Not Available | Negative | 1949409 - 1949855 | 17037.4 |
| magnesium chelatase family protein | SAMN04488090_1515 | Not Available | Negative | 1949966 - 1951504 | 56171.9 |
| dna topoisomerase-1 | SAMN04488090_1516 | Not Available | Negative | 1951670 - 1952755 | 41962.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
