Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrna maturation rnase ybey | SAMN04488090_1497 | Not Available | Positive | 1924695 - 1925114 | 16122.9 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN04488090_1498 | Not Available | Positive | 1925254 - 1927116 | 69677.4 |
| methyltransferase domain-containing protein | SAMN04488090_1499 | Not Available | Positive | 1927240 - 1928130 | 33634.3 |
| polysaccharide lyase family 4, domain ii | SAMN04488090_1500 | Not Available | Positive | 1928136 - 1929737 | 60979.9 |
| tetratricopeptide repeat-containing protein | SAMN04488090_1501 | Not Available | Positive | 1930278 - 1932098 | 70007.9 |
| uncharacterized conserved protein | SAMN04488090_1502 | Not Available | Positive | 1932255 - 1933352 | 40894.9 |
| long-chain acyl-coa synthetase | SAMN04488090_1503 | Not Available | Positive | 1933496 - 1935301 | 67510.1 |
| basic amino acid/polyamine antiporter, apa family | SAMN04488090_1504 | Not Available | Negative | 1935491 - 1936900 | 51076.5 |
| adenylosuccinate lyase | SAMN04488090_1505 | Not Available | Positive | 1937105 - 1938451 | 50779.0 |
| exodeoxyribonuclease i subunit d | SAMN04488090_1506 | Not Available | Positive | 1938714 - 1939925 | 45757.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
