Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide-binding universal stress protein, uspa family | SAMN04488090_0139 | Not Available | Negative | 171198 - 172022 | 29957.8 |
| ca2+-transporting atpase | SAMN04488090_0140 | Not Available | Negative | 172121 - 174613 | 90758.9 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04488090_0141 | Not Available | Negative | 174826 - 175485 | 24512.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0142 | Not Available | Positive | 175820 - 179113 | 120873.0 |
| starch-binding associating with outer membrane | SAMN04488090_0143 | Not Available | Positive | 179116 - 180870 | 65844.4 |
| protein of unknown function | SAMN04488090_0144 | Not Available | Positive | 181094 - 182470 | 51897.8 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488090_0145 | Not Available | Positive | 182605 - 183240 | 25061.8 |
| fecr family protein | SAMN04488090_0146 | Not Available | Positive | 183237 - 184331 | 40807.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0147 | Not Available | Positive | 184425 - 187739 | 120660.0 |
| susd family protein | SAMN04488090_0148 | Not Available | Positive | 187763 - 189214 | 53457.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
