Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase tatc | SAMN04488090_1487 | Not Available | Positive | 1908737 - 1909597 | 32720.7 |
| hypothetical protein | SAMN04488090_1488 | Not Available | Positive | 1909734 - 1910588 | 32571.2 |
| protein of unknown function | SAMN04488090_1489 | Not Available | Negative | 1910683 - 1911054 | 13600.7 |
| hypothetical protein | SAMN04488090_1490 | Not Available | Negative | 1911071 - 1911454 | 14507.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_1491 | Not Available | Positive | 1911616 - 1915557 | 137126.0 |
| hypothetical protein | SAMN04488090_1492 | Not Available | Negative | 1915669 - 1916172 | 19293.0 |
| rod shape-determining protein mrec | SAMN04488090_1493 | Not Available | Negative | 1916188 - 1917036 | 31628.1 |
| rod shape-determining protein mreb | SAMN04488090_1494 | Not Available | Negative | 1917125 - 1918156 | 37221.6 |
| rnase r | SAMN04488090_1495 | Not Available | Positive | 1918380 - 1920710 | 89342.1 |
| protein of unknown function | SAMN04488090_1496 | Not Available | Positive | 1920939 - 1924469 | 136119.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
