Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1467 | Not Available | Negative | 1887119 - 1888696 | 58039.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_1468 | Not Available | Negative | 1888700 - 1889296 | 23162.6 |
| putative beta-lactamase-inhibitor-like, pepsy-like | SAMN04488090_1469 | Not Available | Positive | 1889649 - 1890251 | 21108.0 |
| hypothetical protein | SAMN04488090_1470 | Not Available | Negative | 1890803 - 1891447 | 22810.1 |
| transcriptional regulator, hxlr family | SAMN04488090_1471 | Not Available | Positive | 1891549 - 1891965 | 15785.2 |
| hypothetical protein | SAMN04488090_1472 | Not Available | Negative | 1892018 - 1892395 | 12959.2 |
| excinuclease abc subunit b | SAMN04488090_1473 | Not Available | Negative | 1892502 - 1894529 | 77395.8 |
| hypothetical protein | SAMN04488090_1474 | Not Available | Positive | 1894670 - 1895515 | 31582.3 |
| aspartate-semialdehyde dehydrogenase | SAMN04488090_1475 | Not Available | Negative | 1895549 - 1896541 | 35974.2 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN04488090_1476 | Not Available | Negative | 1896939 - 1897514 | 22294.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
