Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein era | SAMN04488090_1457 | Not Available | Negative | 1879024 - 1879923 | 34530.8 |
| Trna-met | Not Available | Not Available | Positive | 1880066 - 1880141 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1880176 - 1880247 | Not Available |
| fic family protein | SAMN04488090_1460 | Not Available | Negative | 1880294 - 1881442 | 43632.4 |
| glygly-cterm domain-containing protein | SAMN04488090_1461 | Not Available | Negative | 1881666 - 1881911 | 8820.94 |
| aminomethyltransferase | SAMN04488090_1462 | Not Available | Negative | 1882138 - 1883229 | 40039.1 |
| d-alpha,beta-d-heptose 1,7-bisphosphate phosphatase | SAMN04488090_1463 | Not Available | Negative | 1883314 - 1883823 | 19125.0 |
| hypothetical protein | SAMN04488090_1464 | Not Available | Negative | 1884138 - 1884587 | 16397.8 |
| repeat domain-containing protein | SAMN04488090_1465 | Not Available | Negative | 1884722 - 1885828 | 41110.1 |
| protein of unknown function | SAMN04488090_1466 | Not Available | Negative | 1885835 - 1887049 | 45942.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
