Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate phosphoribosyltransferase | SAMN04488090_1447 | Not Available | Negative | 1866945 - 1867931 | 35250.0 |
| anthranilate synthase, component ii | SAMN04488090_1448 | Not Available | Negative | 1867976 - 1868551 | 21542.1 |
| anthranilate synthase component 1 | SAMN04488090_1449 | Not Available | Negative | 1868559 - 1869917 | 51097.5 |
| hypothetical protein | SAMN04488090_1450 | Not Available | Positive | 1870349 - 1870771 | 15750.0 |
| predicted dehydrogenase | SAMN04488090_1451 | Not Available | Negative | 1870891 - 1872369 | 54309.5 |
| sugar phosphate isomerase/epimerase | SAMN04488090_1452 | Not Available | Negative | 1872408 - 1873337 | 34462.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04488090_1453 | Not Available | Positive | 1873675 - 1874955 | 47917.2 |
| dna polymerase-3 subunit epsilon | SAMN04488090_1454 | Not Available | Negative | 1875079 - 1875894 | 30773.2 |
| imp dehydrogenase | SAMN04488090_1455 | Not Available | Positive | 1876080 - 1877549 | 52110.1 |
| gtp-binding protein | SAMN04488090_1456 | Not Available | Negative | 1877640 - 1878947 | 49180.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
