Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock dna-binding protein family | SAMN04488090_1437 | Not Available | Positive | 1853046 - 1853243 | 7106.46 |
| hypothetical protein | SAMN04488090_1438 | Not Available | Positive | 1853263 - 1853748 | 18167.7 |
| lysyl-trna synthetase, class ii | SAMN04488090_1439 | Not Available | Negative | 1853948 - 1855660 | 64889.9 |
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN04488090_1440 | Not Available | Positive | 1855896 - 1857332 | 54950.9 |
| hypothetical protein | SAMN04488090_1441 | Not Available | Negative | 1857612 - 1859405 | 67165.2 |
| succinate dehydrogenase / fumarate reductase iron-sulfur subunit | SAMN04488090_1442 | Not Available | Negative | 1859721 - 1860482 | 27504.7 |
| succinate dehydrogenase subunit a | SAMN04488090_1443 | Not Available | Negative | 1860560 - 1862548 | 73661.3 |
| succinate dehydrogenase / fumarate reductase cytochrome b subunit | SAMN04488090_1444 | Not Available | Negative | 1862612 - 1863394 | 29666.6 |
| hypothetical protein | SAMN04488090_1445 | Not Available | Positive | 1863912 - 1865536 | 58663.3 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN04488090_1446 | Not Available | Negative | 1866095 - 1866889 | 29763.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
