Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN04488090_1427 | Not Available | Positive | 1840241 - 1841407 | 43205.6 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488090_1428 | Not Available | Negative | 1841390 - 1844500 | 114577.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04488090_1429 | Not Available | Negative | 1844534 - 1845625 | 39738.9 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN04488090_1430 | Not Available | Negative | 1845622 - 1846905 | 49071.5 |
| signal transduction histidine kinase | SAMN04488090_1431 | Not Available | Negative | 1846988 - 1848346 | 51110.0 |
| two-component system, ompr family, copper resistance phosphate regulon response regulator cusr | SAMN04488090_1432 | Not Available | Negative | 1848351 - 1849130 | 29877.9 |
| putative adhesin | SAMN04488090_1433 | Not Available | Positive | 1849356 - 1850387 | 36649.4 |
| abc-type lipoprotein export system, atpase component | SAMN04488090_1434 | Not Available | Positive | 1850545 - 1851231 | 25568.7 |
| outer membrane protein | SAMN04488090_1435 | Not Available | Positive | 1851245 - 1852549 | 48468.8 |
| phage shock protein c (pspc) family protein | SAMN04488090_1436 | Not Available | Negative | 1852660 - 1852881 | 8628.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
