Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| macb-like core domain-containing protein | SAMN04488090_1417 | Not Available | Positive | 1820541 - 1822925 | 88591.9 |
| ftsx-like permease family protein | SAMN04488090_1418 | Not Available | Positive | 1822929 - 1825361 | 89725.5 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488090_1419 | Not Available | Positive | 1825770 - 1828145 | 88700.9 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488090_1420 | Not Available | Positive | 1828152 - 1830557 | 89049.4 |
| abc-type transport system, involved in lipoprotein release, permease component | SAMN04488090_1421 | Not Available | Positive | 1830677 - 1833070 | 89760.9 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488090_1422 | Not Available | Positive | 1833241 - 1835634 | 89281.5 |
| putative abc transport system permease protein | SAMN04488090_1423 | Not Available | Positive | 1835807 - 1838185 | 87958.2 |
| polyisoprenoid-binding protein ycei | SAMN04488090_1424 | Not Available | Positive | 1838376 - 1838954 | 20793.8 |
| curved dna-binding protein | SAMN04488090_1425 | Not Available | Positive | 1839047 - 1839952 | 33468.1 |
| merr hth family regulatory protein | SAMN04488090_1426 | Not Available | Positive | 1839958 - 1840251 | 11464.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
