Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488090_1406 | Not Available | Positive | 1800546 - 1801523 | 37411.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_1407 | Not Available | Positive | 1801552 - 1804947 | 123729.0 |
| starch-binding associating with outer membrane | SAMN04488090_1408 | Not Available | Positive | 1804961 - 1806397 | 53974.5 |
| hypothetical protein | SAMN04488090_1410 | Not Available | Positive | 1808188 - 1808730 | 20533.3 |
| hypothetical protein | SAMN04488090_1411 | Not Available | Negative | 1808669 - 1810444 | 65857.0 |
| hypothetical protein | SAMN04488090_1412 | Not Available | Positive | 1810505 - 1810756 | 9513.34 |
| ftsx-like permease family protein | SAMN04488090_1413 | Not Available | Positive | 1810816 - 1813227 | 89225.3 |
| duplicated orphan permease | SAMN04488090_1414 | Not Available | Positive | 1813278 - 1815677 | 88577.9 |
| putative abc transport system permease protein | SAMN04488090_1415 | Not Available | Positive | 1815713 - 1818106 | 88909.6 |
| putative abc transport system permease protein | SAMN04488090_1416 | Not Available | Positive | 1818121 - 1820514 | 88619.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
