Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase, fkbm family | SAMN04488090_1396 | Not Available | Positive | 1784099 - 1784839 | 27792.5 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN04488090_1397 | Not Available | Positive | 1785082 - 1785588 | 18109.1 |
| isoquinoline 1-oxidoreductase, beta subunit | SAMN04488090_1398 | Not Available | Positive | 1785598 - 1787760 | 78411.6 |
| catalase-peroxidase | SAMN04488090_1399 | Not Available | Negative | 1787977 - 1790184 | 80979.5 |
| predicted neuraminidase (sialidase) | SAMN04488090_1400 | Not Available | Positive | 1790537 - 1791607 | 39802.4 |
| duplicated orphan permease | SAMN04488090_1401 | Not Available | Positive | 1791722 - 1794154 | 89818.5 |
| macb-like core domain-containing protein | SAMN04488090_1402 | Not Available | Positive | 1794326 - 1796707 | 89938.1 |
| duplicated orphan permease | SAMN04488090_1403 | Not Available | Positive | 1796709 - 1799117 | 89142.4 |
| hypothetical protein | SAMN04488090_1404 | Not Available | Positive | 1799130 - 1799684 | 19943.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_1405 | Not Available | Positive | 1799890 - 1800459 | 22492.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
