Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted oxidoreductase | SAMN04488090_0129 | Not Available | Positive | 161774 - 162775 | 36174.8 |
| monovalent cation:h+ antiporter, cpa1 family | SAMN04488090_0130 | Not Available | Positive | 162883 - 164454 | 57901.8 |
| hypothetical protein | SAMN04488090_0131 | Not Available | Negative | 164620 - 164970 | 12799.4 |
| pas domain s-box-containing protein | SAMN04488090_0132 | Not Available | Positive | 165115 - 166728 | 61814.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_0133 | Not Available | Positive | 166706 - 167770 | 40684.1 |
| fixh protein | SAMN04488090_0134 | Not Available | Positive | 167885 - 168160 | 10801.2 |
| l,d-transpeptidase catalytic domain | SAMN04488090_0135 | Not Available | Positive | 168157 - 169266 | 41163.6 |
| hypothetical protein | SAMN04488090_0136 | Not Available | Positive | 169324 - 169809 | 18273.1 |
| hypothetical protein | SAMN04488090_0137 | Not Available | Negative | 169865 - 170242 | 13659.5 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488090_0138 | Not Available | Positive | 170386 - 171159 | 29938.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
