Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate dehydratase | SAMN04488090_1376 | Not Available | Negative | 1764044 - 1764463 | 15342.5 |
| integrase/recombinase xerd | SAMN04488090_1377 | Not Available | Positive | 1764536 - 1765447 | 34506.9 |
| protein of unknown function | SAMN04488090_1378 | Not Available | Negative | 1765591 - 1766499 | 33840.6 |
| putative dna-binding domain-containing protein | SAMN04488090_1379 | Not Available | Positive | 1766607 - 1767260 | 24609.6 |
| putative membrane protein | SAMN04488090_1380 | Not Available | Negative | 1767253 - 1767837 | 21152.0 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN04488090_1381 | Not Available | Negative | 1768082 - 1770487 | 88713.9 |
| protein of unknown function | SAMN04488090_1382 | Not Available | Negative | 1770522 - 1771004 | 18272.7 |
| dna-binding transcriptional regulator, marr family | SAMN04488090_1383 | Not Available | Negative | 1771052 - 1771495 | 17004.6 |
| aerobic c4-dicarboxylate transport protein | SAMN04488090_1384 | Not Available | Negative | 1771608 - 1772888 | 46370.4 |
| outer membrane lipoprotein-sorting protein | SAMN04488090_1385 | Not Available | Positive | 1773018 - 1773716 | 26332.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
