Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | SAMN04488090_1366 | Not Available | Positive | 1752665 - 1753438 | 28694.7 |
| tetratricopeptide repeat-containing protein | SAMN04488090_1367 | Not Available | Negative | 1753454 - 1754779 | 49646.4 |
| 1,4-dihydroxy-2-naphthoate prenyltransferase | SAMN04488090_1368 | Not Available | Negative | 1754964 - 1755857 | 32213.9 |
| glutathione peroxidase | SAMN04488090_1369 | Not Available | Negative | 1755939 - 1756508 | 21157.4 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN04488090_1370 | Not Available | Positive | 1756663 - 1757640 | 36656.0 |
| arginyl-trna synthetase | SAMN04488090_1371 | Not Available | Negative | 1757647 - 1759428 | 66535.9 |
| hypothetical protein | SAMN04488090_1372 | Not Available | Positive | 1759732 - 1760964 | 44634.0 |
| hypothetical protein | SAMN04488090_1373 | Not Available | Positive | 1761063 - 1762343 | 46513.8 |
| multiple antibiotic resistance protein | SAMN04488090_1374 | Not Available | Negative | 1762374 - 1762946 | 20264.9 |
| phosphoserine aminotransferase | SAMN04488090_1375 | Not Available | Negative | 1762946 - 1763992 | 38881.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
