Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protease ftsh catalytic subunit | SAMN04488090_1356 | Not Available | Positive | 1737546 - 1739666 | 77341.1 |
| udp-2,3-diacylglucosamine hydrolase | SAMN04488090_1357 | Not Available | Positive | 1739800 - 1740630 | 32265.4 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_1358 | Not Available | Negative | 1740776 - 1743223 | 91259.1 |
| hypothetical protein | SAMN04488090_1359 | Not Available | Negative | 1743494 - 1743748 | 9805.13 |
| transaldolase | SAMN04488090_1360 | Not Available | Negative | 1743896 - 1744552 | 23704.8 |
| membrane fusion protein, multidrug efflux system | SAMN04488090_1361 | Not Available | Positive | 1744876 - 1745955 | 38981.4 |
| multidrug efflux pump | SAMN04488090_1362 | Not Available | Positive | 1745989 - 1749096 | 114095.0 |
| putative peptidoglycan binding domain-containing protein | SAMN04488090_1363 | Not Available | Negative | 1749306 - 1750262 | 35171.7 |
| hypothetical protein | SAMN04488090_1364 | Not Available | Negative | 1750352 - 1751824 | 55716.1 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN04488090_1365 | Not Available | Negative | 1752080 - 1752514 | 16687.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
