Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb superfamily protein | SAMN04488090_1346 | Not Available | Negative | 1727911 - 1728444 | 20296.1 |
| rhamnogalacturonyl hydrolase yesr | SAMN04488090_1347 | Not Available | Positive | 1728987 - 1730345 | 49829.6 |
| dna uptake protein come | SAMN04488090_1348 | Not Available | Positive | 1730466 - 1731344 | 33933.9 |
| hypothetical protein | SAMN04488090_1349 | Not Available | Negative | 1731392 - 1732201 | 30155.3 |
| ribose 5-phosphate isomerase b | SAMN04488090_1350 | Not Available | Positive | 1732346 - 1732774 | 15320.1 |
| hypothetical protein | SAMN04488090_1351 | Not Available | Negative | 1732827 - 1734230 | 53313.3 |
| ribosome-binding factor a | SAMN04488090_1352 | Not Available | Positive | 1734435 - 1734812 | 14316.3 |
| lipoprotein-releasing system permease protein | SAMN04488090_1353 | Not Available | Positive | 1734861 - 1736075 | 44432.1 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN04488090_1354 | Not Available | Negative | 1736077 - 1736832 | 27866.3 |
| ribosome-associated protein | SAMN04488090_1355 | Not Available | Positive | 1737002 - 1737391 | 14950.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
