Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl oligopeptidase serine peptidase. merops family s09a | SAMN04488090_1336 | Not Available | Negative | 1716379 - 1718478 | 78349.1 |
| two component transcriptional regulator, lyttr family | SAMN04488090_1337 | Not Available | Negative | 1718580 - 1719290 | 26679.8 |
| histidine kinase | SAMN04488090_1338 | Not Available | Negative | 1719287 - 1720378 | 41602.1 |
| hypothetical protein | SAMN04488090_1339 | Not Available | Positive | 1720631 - 1720939 | 11712.3 |
| hypothetical protein | SAMN04488090_1340 | Not Available | Negative | 1720994 - 1721263 | 10216.7 |
| glucosamine-6-phosphate deaminase | SAMN04488090_1341 | Not Available | Negative | 1721418 - 1723358 | 72949.9 |
| tigr02757 family protein | SAMN04488090_1342 | Not Available | Positive | 1723623 - 1724417 | 30704.9 |
| tetratricopeptide repeat-containing protein | SAMN04488090_1343 | Not Available | Negative | 1724421 - 1725884 | 56197.3 |
| hypothetical protein | SAMN04488090_1344 | Not Available | Negative | 1725961 - 1726716 | 29132.8 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN04488090_1345 | Not Available | Negative | 1726807 - 1727907 | 40512.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
