Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1316 | Not Available | Positive | 1694409 - 1694996 | 22539.0 |
| protein of unknown function | SAMN04488090_1317 | Not Available | Negative | 1695098 - 1695997 | 32809.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_1318 | Not Available | Negative | 1696000 - 1698360 | 87905.8 |
| hypothetical protein | SAMN04488090_1319 | Not Available | Negative | 1698543 - 1699850 | 48600.0 |
| protein of unknown function | SAMN04488090_1320 | Not Available | Negative | 1699908 - 1700243 | 12451.2 |
| hypothetical protein | SAMN04488090_1321 | Not Available | Negative | 1700247 - 1701341 | 39890.1 |
| two component transcriptional regulator, lyttr family | SAMN04488090_1322 | Not Available | Negative | 1701773 - 1702477 | 26544.5 |
| ghkl domain-containing protein | SAMN04488090_1323 | Not Available | Negative | 1702474 - 1703508 | 39395.4 |
| hypothetical protein | SAMN04488090_1324 | Not Available | Negative | 1703635 - 1705605 | 72508.7 |
| fecr family protein | SAMN04488090_1325 | Not Available | Negative | 1705629 - 1706615 | 36711.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
