Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl 1,2-cyclic phosphate phosphodiesterase | SAMN04488090_1306 | Not Available | Positive | 1684339 - 1685103 | 28596.6 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/beta-phosphoglucomutase family hydrolase | SAMN04488090_1307 | Not Available | Positive | 1685115 - 1685786 | 24448.2 |
| phosphomannomutase | SAMN04488090_1308 | Not Available | Negative | 1685876 - 1687267 | 50130.5 |
| hypothetical protein | SAMN04488090_1309 | Not Available | Positive | 1687428 - 1687637 | 7962.65 |
| transcriptional regulator, marr family with acetyltransferase activity | SAMN04488090_1310 | Not Available | Positive | 1687719 - 1688660 | 36160.5 |
| n-acetylglutamate synthase, gnat family | SAMN04488090_1311 | Not Available | Positive | 1688657 - 1689178 | 19116.8 |
| hypothetical protein | SAMN04488090_1312 | Not Available | Negative | 1689139 - 1690176 | 39329.9 |
| hypothetical protein | SAMN04488090_1313 | Not Available | Negative | 1690236 - 1690568 | 11916.6 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488090_1314 | Not Available | Negative | 1690705 - 1692726 | 72148.6 |
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN04488090_1315 | Not Available | Positive | 1692917 - 1694146 | 45132.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
