Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1296 | Not Available | Positive | 1674644 - 1675390 | 27414.6 |
| lysm repeat-containing protein | SAMN04488090_1297 | Not Available | Positive | 1675377 - 1676378 | 36439.7 |
| hypothetical protein | SAMN04488090_1298 | Not Available | Positive | 1676918 - 1677097 | 6902.78 |
| pas domain s-box-containing protein | SAMN04488090_1299 | Not Available | Negative | 1677098 - 1680043 | 111536.0 |
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN04488090_1300 | Not Available | Negative | 1680063 - 1680551 | 18604.2 |
| dimethyladenosine transferase | SAMN04488090_1301 | Not Available | Positive | 1680742 - 1681536 | 30231.7 |
| magnesium transporter | SAMN04488090_1302 | Not Available | Positive | 1681526 - 1682887 | 50379.0 |
| d-tyrosyl-trna(tyr) deacylase | SAMN04488090_1303 | Not Available | Positive | 1682889 - 1683341 | 16284.9 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN04488090_1304 | Not Available | Positive | 1683338 - 1683676 | 12570.8 |
| response regulator receiver domain-containing protein | SAMN04488090_1305 | Not Available | Positive | 1683890 - 1684273 | 14176.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
