Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04488090_1286 | Not Available | Positive | 1660562 - 1663900 | 124473.0 |
| chemotaxis protein methyltransferase cher | SAMN04488090_1287 | Not Available | Positive | 1663928 - 1664755 | 31973.5 |
| cheb methylesterase | SAMN04488090_1288 | Not Available | Positive | 1664694 - 1665338 | 22852.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488090_1289 | Not Available | Positive | 1665335 - 1666435 | 41871.6 |
| dinb superfamily protein | SAMN04488090_1290 | Not Available | Negative | 1666414 - 1666863 | 17092.3 |
| aminopeptidase | SAMN04488090_1291 | Not Available | Negative | 1666863 - 1668473 | 61229.0 |
| adenosylhomocysteinase | SAMN04488090_1292 | Not Available | Negative | 1668621 - 1669934 | 48251.9 |
| cell division transport system atp-binding protein | SAMN04488090_1293 | Not Available | Positive | 1670315 - 1671052 | 27686.9 |
| capsule assembly protein wzi | SAMN04488090_1294 | Not Available | Negative | 1671176 - 1672720 | 57953.5 |
| response regulator receiver domain-containing protein | SAMN04488090_1295 | Not Available | Negative | 1672863 - 1674437 | 61140.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
