Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine protease, c1a family | SAMN04488090_1256 | Not Available | Negative | 1623949 - 1625589 | 62117.2 |
| nadh dehydrogenase subunit h | SAMN04488090_1257 | Not Available | Positive | 1625735 - 1626820 | 39804.8 |
| hypothetical protein | SAMN04488090_1258 | Not Available | Positive | 1626935 - 1627348 | 14704.7 |
| ferrochelatase | SAMN04488090_1259 | Not Available | Positive | 1627516 - 1628553 | 39354.1 |
| cysteine desulfurase iscs | SAMN04488090_1260 | Not Available | Positive | 1628558 - 1629688 | 40538.4 |
| nudix domain-containing protein | SAMN04488090_1261 | Not Available | Positive | 1629781 - 1630326 | 21546.5 |
| fdhd protein | SAMN04488090_1262 | Not Available | Positive | 1630323 - 1631123 | 28605.5 |
| oxidoreductase alpha (molybdopterin) subunit | SAMN04488090_1263 | Not Available | Positive | 1631120 - 1633411 | 84213.6 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488090_1264 | Not Available | Positive | 1633522 - 1634679 | 43601.8 |
| hypothetical protein | SAMN04488090_1265 | Not Available | Negative | 1634672 - 1635049 | 13987.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
