Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acetyltransferase | SAMN04488090_1246 | Not Available | Negative | 1612086 - 1613210 | 39686.6 |
| hypothetical protein | SAMN04488090_1247 | Not Available | Negative | 1613222 - 1613908 | 26202.3 |
| signal transduction histidine kinase | SAMN04488090_1248 | Not Available | Negative | 1614052 - 1616631 | 96617.2 |
| response regulator receiver domain-containing protein | SAMN04488090_1249 | Not Available | Negative | 1616651 - 1617031 | 13926.8 |
| uncharacterized conserved protein, circularly permuted atpgrasp superfamily | SAMN04488090_1250 | Not Available | Negative | 1617361 - 1618791 | 54067.0 |
| peptide-methionine (r)-s-oxide reductase | SAMN04488090_1251 | Not Available | Negative | 1618937 - 1619416 | 17965.5 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04488090_1252 | Not Available | Negative | 1619480 - 1620409 | 34138.2 |
| small subunit ribosomal protein s21 | SAMN04488090_1253 | Not Available | Positive | 1620593 - 1620787 | 7630.5 |
| hypothetical protein | SAMN04488090_1254 | Not Available | Negative | 1621510 - 1622172 | 24338.0 |
| asparaginyl-trna synthetase | SAMN04488090_1255 | Not Available | Positive | 1622386 - 1623840 | 55180.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
