Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN04488090_1236 | Not Available | Negative | 1600598 - 1601062 | 16714.2 |
| cupin domain-containing protein | SAMN04488090_1237 | Not Available | Negative | 1601190 - 1601531 | 12616.1 |
| hypothetical protein | SAMN04488090_1238 | Not Available | Negative | 1601639 - 1602124 | 19235.2 |
| transcriptional regulator, tetr family | SAMN04488090_1239 | Not Available | Negative | 1602188 - 1602745 | 20551.8 |
| dna sulfur modification protein dnde | SAMN04488090_1240 | Not Available | Negative | 1602897 - 1605176 | 82578.8 |
| pin domain nuclease, a component of toxin-antitoxin system (pin domain) | SAMN04488090_1241 | Not Available | Negative | 1605668 - 1606234 | 21232.1 |
| helix-turn-helix | SAMN04488090_1242 | Not Available | Negative | 1606427 - 1607152 | 27603.0 |
| fad dependent oxidoreductase tigr03364 | SAMN04488090_1243 | Not Available | Positive | 1607394 - 1608572 | 43228.5 |
| iron complex outermembrane recepter protein | SAMN04488090_1244 | Not Available | Negative | 1608704 - 1610617 | 72406.6 |
| long-chain acyl-coa synthetase | SAMN04488090_1245 | Not Available | Negative | 1610746 - 1612089 | 49593.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
