Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1215 | Not Available | Negative | 1576463 - 1576984 | 19702.0 |
| dna repair protein rada/sms | SAMN04488090_1216 | Not Available | Negative | 1576984 - 1578354 | 49792.9 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488090_1217 | Not Available | Positive | 1578722 - 1579414 | 25689.8 |
| hypothetical protein | SAMN04488090_1219 | Not Available | Positive | 1579859 - 1580089 | 8259.14 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN04488090_1220 | Not Available | Positive | 1580216 - 1581268 | 40055.8 |
| putative transcriptional regulator | SAMN04488090_1221 | Not Available | Negative | 1581397 - 1581597 | 7452.0 |
| hypothetical protein | SAMN04488090_1222 | Not Available | Negative | 1581594 - 1582133 | 20643.4 |
| cell wall-associated hydrolase, nlpc family | SAMN04488090_1223 | Not Available | Negative | 1582478 - 1582996 | 19098.1 |
| acetyltransferase (gnat) family protein | SAMN04488090_1224 | Not Available | Negative | 1583162 - 1583653 | 18042.4 |
| glycyl-trna synthetase | SAMN04488090_1225 | Not Available | Negative | 1583657 - 1585138 | 56398.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
