Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd family protein | SAMN04488090_1205 | Not Available | Positive | 1565476 - 1566852 | 50533.6 |
| carbamoyltransferase | SAMN04488090_1206 | Not Available | Positive | 1567131 - 1568993 | 70017.3 |
| lysophospholipase l1 | SAMN04488090_1207 | Not Available | Positive | 1569014 - 1570138 | 42442.4 |
| hypothetical protein | SAMN04488090_1208 | Not Available | Positive | 1570151 - 1570300 | 5542.18 |
| hypothetical protein | SAMN04488090_1209 | Not Available | Positive | 1570305 - 1570667 | 13407.0 |
| protein of unknown function | SAMN04488090_1210 | Not Available | Negative | 1570773 - 1572422 | 63517.6 |
| nte family protein | SAMN04488090_1211 | Not Available | Negative | 1572621 - 1573400 | 28474.5 |
| protein of unknown function | SAMN04488090_1212 | Not Available | Negative | 1573523 - 1573936 | 14808.7 |
| hypothetical protein | SAMN04488090_1213 | Not Available | Negative | 1574033 - 1575472 | 52645.8 |
| hypothetical protein | SAMN04488090_1214 | Not Available | Negative | 1575598 - 1576326 | 26356.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
