Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN04488090_1195 | Not Available | Negative | 1551395 - 1552156 | 29001.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488090_1196 | Not Available | Positive | 1552256 - 1553698 | 55356.3 |
| sugar phosphate isomerase/epimerase | SAMN04488090_1197 | Not Available | Negative | 1553751 - 1554602 | 31470.9 |
| protein of unknown function duf58 | SAMN04488090_1198 | Not Available | Negative | 1554659 - 1555564 | 35549.6 |
| rare lipoprotein a | SAMN04488090_1199 | Not Available | Negative | 1556042 - 1556548 | 18610.9 |
| protein of unknown function | SAMN04488090_1200 | Not Available | Positive | 1556931 - 1557251 | 12896.0 |
| hypothetical protein | SAMN04488090_1201 | Not Available | Positive | 1557408 - 1558511 | 40448.4 |
| protein of unknown function | SAMN04488090_1202 | Not Available | Negative | 1558564 - 1559859 | 49067.0 |
| atp-binding cassette, subfamily f, member 3 | SAMN04488090_1203 | Not Available | Negative | 1559947 - 1561881 | 72971.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_1204 | Not Available | Positive | 1562303 - 1565443 | 113110.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
