Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488090_0109 | Not Available | Positive | 140740 - 141567 | 29687.4 |
| hypothetical protein | SAMN04488090_0110 | Not Available | Negative | 141570 - 142001 | 15434.5 |
| putative hydrolase of the had superfamily | SAMN04488090_0111 | Not Available | Positive | 142320 - 143003 | 26006.7 |
| chloramphenicol o-acetyltransferase type a | SAMN04488090_0112 | Not Available | Positive | 143000 - 143623 | 24034.2 |
| hpp family protein | SAMN04488090_0113 | Not Available | Positive | 143803 - 144399 | 21553.8 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN04488090_0114 | Not Available | Positive | 144409 - 145086 | 25648.3 |
| ubia prenyltransferase family protein | SAMN04488090_0115 | Not Available | Positive | 145093 - 145986 | 34151.5 |
| transcriptional regulator, gntr family | SAMN04488090_0116 | Not Available | Negative | 145971 - 147419 | 54107.1 |
| cupin domain-containing protein | SAMN04488090_0117 | Not Available | Positive | 147518 - 147916 | 14892.4 |
| hypothetical protein | SAMN04488090_0118 | Not Available | Positive | 147920 - 148477 | 20834.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
