Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1185 | Not Available | Negative | 1537248 - 1538027 | 29576.7 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_1186 | Not Available | Negative | 1538124 - 1540376 | 83940.3 |
| abc-2 type transport system atp-binding protein | SAMN04488090_1187 | Not Available | Negative | 1540527 - 1541429 | 33564.5 |
| rod shape determining protein roda | SAMN04488090_1188 | Not Available | Negative | 1541522 - 1542805 | 47382.3 |
| penicillin-binding protein 2 | SAMN04488090_1189 | Not Available | Negative | 1542819 - 1544753 | 72139.9 |
| propionyl-coa carboxylase beta chain | SAMN04488090_1190 | Not Available | Negative | 1545000 - 1546550 | 56346.3 |
| atp-dependent hsluv protease atp-binding subunit hslu | SAMN04488090_1191 | Not Available | Positive | 1546685 - 1548064 | 51059.6 |
| hypothetical protein | SAMN04488090_1192 | Not Available | Positive | 1548070 - 1548408 | 12234.4 |
| hypothetical protein | SAMN04488090_1193 | Not Available | Negative | 1548474 - 1550027 | 57549.2 |
| 6-phosphofructokinase | SAMN04488090_1194 | Not Available | Positive | 1550354 - 1551328 | 34935.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
