Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1175 | Not Available | Positive | 1522365 - 1523033 | 23616.5 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_1176 | Not Available | Positive | 1523046 - 1524044 | 35430.2 |
| c1q domain-containing protein | SAMN04488090_1177 | Not Available | Positive | 1524059 - 1524853 | 25785.5 |
| phosphoglycerol transferase mdob | SAMN04488090_1178 | Not Available | Positive | 1524963 - 1526957 | 76311.6 |
| predicted acyltransferase | SAMN04488090_1179 | Not Available | Negative | 1526927 - 1528195 | 46508.1 |
| n-acetylated-alpha-linked acidic dipeptidase | SAMN04488090_1180 | Not Available | Positive | 1528493 - 1530670 | 78551.5 |
| hypothetical protein | SAMN04488090_1181 | Not Available | Positive | 1530846 - 1531424 | 20552.8 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN04488090_1182 | Not Available | Positive | 1531529 - 1532974 | 52529.9 |
| atp-dependent lon protease | SAMN04488090_1183 | Not Available | Negative | 1533168 - 1535693 | 94723.5 |
| predicted arabinose efflux permease, mfs family | SAMN04488090_1184 | Not Available | Negative | 1535907 - 1537136 | 44275.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
