Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN04488090_1165 | Not Available | Positive | 1509259 - 1509990 | 28437.5 |
| microcystin-dependent protein | SAMN04488090_1166 | Not Available | Positive | 1510221 - 1510793 | 19925.7 |
| microcystin-dependent protein | SAMN04488090_1167 | Not Available | Positive | 1510795 - 1511355 | 19334.1 |
| microcystin-dependent protein | SAMN04488090_1168 | Not Available | Positive | 1511362 - 1511925 | 19209.6 |
| methionyl-trna formyltransferase | SAMN04488090_1169 | Not Available | Positive | 1511926 - 1512840 | 33376.5 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_1170 | Not Available | Positive | 1512857 - 1515247 | 83320.2 |
| cytochrome c | SAMN04488090_1171 | Not Available | Positive | 1515460 - 1518858 | 125118.0 |
| predicted membrane protein | SAMN04488090_1172 | Not Available | Positive | 1519025 - 1520008 | 36771.7 |
| hypothetical protein | SAMN04488090_1173 | Not Available | Positive | 1519992 - 1521146 | 41996.6 |
| hypothetical protein | SAMN04488090_1174 | Not Available | Positive | 1521421 - 1522089 | 22997.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
