Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructan beta-fructosidase | SAMN04488090_1155 | Not Available | Negative | 1491583 - 1493109 | 56071.7 |
| starch-binding associating with outer membrane | SAMN04488090_1156 | Not Available | Negative | 1493247 - 1494962 | 63703.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_1157 | Not Available | Negative | 1494967 - 1498119 | 114690.0 |
| fructokinase | SAMN04488090_1158 | Not Available | Negative | 1498220 - 1499092 | 32399.2 |
| mfs transporter, sugar porter (sp) family | SAMN04488090_1159 | Not Available | Negative | 1499114 - 1500427 | 47885.1 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN04488090_1160 | Not Available | Negative | 1500624 - 1503347 | 101439.0 |
| hypothetical protein | SAMN04488090_1161 | Not Available | Positive | 1503647 - 1504558 | 31520.2 |
| hypothetical protein | SAMN04488090_1162 | Not Available | Positive | 1504577 - 1505491 | 31744.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_1163 | Not Available | Positive | 1505504 - 1506229 | 26276.9 |
| ligand-binding sensor domain-containing protein | SAMN04488090_1164 | Not Available | Positive | 1506266 - 1509262 | 113588.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
