Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin amidase | SAMN04488090_1145 | Not Available | Negative | 1478828 - 1481224 | 89828.4 |
| hypothetical protein | SAMN04488090_1146 | Not Available | Negative | 1481313 - 1483565 | 84319.5 |
| protein of unknown function | SAMN04488090_1147 | Not Available | Negative | 1483579 - 1484703 | 41575.5 |
| tonb-dependent receptor plug domain | SAMN04488090_1148 | Not Available | Negative | 1484703 - 1487468 | 103792.0 |
| hypothetical protein | SAMN04488090_1149 | Not Available | Negative | 1487469 - 1488188 | 27461.9 |
| hypothetical protein | SAMN04488090_1150 | Not Available | Positive | 1488539 - 1488937 | 14711.0 |
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN04488090_1151 | Not Available | Positive | 1488968 - 1489225 | 8991.61 |
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN04488090_1152 | Not Available | Negative | 1489295 - 1489768 | 17827.3 |
| probable dna metabolism protein | SAMN04488090_1153 | Not Available | Negative | 1489862 - 1490578 | 27329.4 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN04488090_1154 | Not Available | Negative | 1490708 - 1491475 | 29373.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
