Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_1135 | Not Available | Positive | 1468763 - 1470304 | 53688.0 |
| hypothetical protein | SAMN04488090_1136 | Not Available | Negative | 1470449 - 1471165 | 27410.2 |
| yd repeat-containing protein | SAMN04488090_1137 | Not Available | Negative | 1471248 - 1471997 | 27281.2 |
| putative sigma-54 modulation protein | SAMN04488090_1138 | Not Available | Negative | 1472135 - 1472491 | 13291.9 |
| nad+ synthase (glutamine-hydrolysing) | SAMN04488090_1139 | Not Available | Negative | 1472827 - 1474839 | 74966.0 |
| glycerophosphoryl diester phosphodiesterase | SAMN04488090_1140 | Not Available | Negative | 1474930 - 1475682 | 28326.2 |
| lipocalin-like domain-containing protein | SAMN04488090_1141 | Not Available | Negative | 1475828 - 1476262 | 16149.0 |
| hypothetical protein | SAMN04488090_1142 | Not Available | Positive | 1476376 - 1477179 | 29721.0 |
| transcriptional regulator, tetr family | SAMN04488090_1143 | Not Available | Positive | 1477397 - 1477978 | 21263.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488090_1144 | Not Available | Positive | 1478032 - 1478778 | 26102.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
