Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488090_1125 | Not Available | Positive | 1455970 - 1456833 | 32088.8 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488090_1126 | Not Available | Negative | 1457230 - 1458729 | 55329.6 |
| uncharacterized osmc-related protein | SAMN04488090_1127 | Not Available | Negative | 1458743 - 1459156 | 14784.9 |
| lipoic acid synthetase | SAMN04488090_1128 | Not Available | Positive | 1459367 - 1460275 | 33796.6 |
| lycopene beta-cyclase | SAMN04488090_1129 | Not Available | Positive | 1460414 - 1461571 | 44249.9 |
| methionine adenosyltransferase | SAMN04488090_1130 | Not Available | Positive | 1461799 - 1463055 | 45896.5 |
| predicted membrane protein | SAMN04488090_1131 | Not Available | Positive | 1463170 - 1465251 | 76199.1 |
| signal peptidase i | SAMN04488090_1132 | Not Available | Negative | 1465281 - 1466423 | 43701.3 |
| hypothetical protein | SAMN04488090_1133 | Not Available | Negative | 1466487 - 1466903 | 14915.6 |
| hypothetical protein | SAMN04488090_1134 | Not Available | Positive | 1467298 - 1468659 | 46345.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
