Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coenzyme a synthetase | SAMN04488090_1095 | Not Available | Positive | 1422047 - 1423951 | 70489.1 |
| dna polymerase iii, alpha subunit | SAMN04488090_1096 | Not Available | Negative | 1423996 - 1427013 | 114795.0 |
| hypothetical protein | SAMN04488090_1097 | Not Available | Negative | 1427001 - 1427393 | 14579.0 |
| dna polymerase-4 | SAMN04488090_1098 | Not Available | Negative | 1427390 - 1428544 | 43485.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_1099 | Not Available | Positive | 1428710 - 1429276 | 21674.0 |
| hypothetical protein | SAMN04488090_1100 | Not Available | Negative | 1429287 - 1429589 | 11535.3 |
| hypothetical protein | SAMN04488090_1101 | Not Available | Negative | 1429567 - 1429740 | 6628.04 |
| quaternary ammonium compound-resistance protein suge | SAMN04488090_1102 | Not Available | Positive | 1430034 - 1430360 | 11690.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_1103 | Not Available | Positive | 1430569 - 1433169 | 94003.4 |
| sugar phosphate isomerase/epimerase | SAMN04488090_1104 | Not Available | Negative | 1433332 - 1434246 | 32642.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
