Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04488090_0099 | Not Available | Positive | 131636 - 132301 | 25538.7 |
| hypothetical protein | SAMN04488090_0100 | Not Available | Negative | 132224 - 132472 | 8812.09 |
| hypothetical protein | SAMN04488090_0101 | Not Available | Negative | 132478 - 132810 | 13057.1 |
| hypothetical protein | SAMN04488090_0102 | Not Available | Positive | 132969 - 133169 | 7350.0 |
| dna end-binding protein ku | SAMN04488090_0103 | Not Available | Positive | 133212 - 133985 | 28866.6 |
| peroxiredoxin | SAMN04488090_0104 | Not Available | Positive | 134050 - 135180 | 42052.2 |
| arac-type dna-binding protein | SAMN04488090_0105 | Not Available | Positive | 135342 - 136205 | 32806.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488090_0106 | Not Available | Positive | 136371 - 137489 | 42089.1 |
| bifunctional non-homologous end joining protein ligd | SAMN04488090_0107 | Not Available | Negative | 137499 - 139970 | 93132.9 |
| ferritin-like metal-binding protein ycie | SAMN04488090_0108 | Not Available | Positive | 140067 - 140681 | 22774.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
