Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_1085 | Not Available | Positive | 1412477 - 1413166 | 25911.1 |
| hypothetical protein | SAMN04488090_1086 | Not Available | Negative | 1413249 - 1413752 | 19431.3 |
| protein of unknown function | SAMN04488090_1087 | Not Available | Positive | 1414074 - 1414916 | 29376.0 |
| cro/c1-type hth dna-binding domain-containing protein | SAMN04488090_1088 | Not Available | Positive | 1415314 - 1415682 | 14060.2 |
| helix-turn-helix domain-containing protein | SAMN04488090_1089 | Not Available | Positive | 1416056 - 1416475 | 16363.8 |
| sugar transporter | SAMN04488090_1090 | Not Available | Positive | 1416671 - 1418173 | 54789.2 |
| hypothetical protein | SAMN04488090_1091 | Not Available | Positive | 1418175 - 1418393 | 7998.91 |
| hypothetical protein | SAMN04488090_1092 | Not Available | Positive | 1418611 - 1418811 | 8087.22 |
| na+/proline symporter | SAMN04488090_1093 | Not Available | Positive | 1418804 - 1421491 | 99996.4 |
| response regulator receiver domain-containing protein | SAMN04488090_1094 | Not Available | Positive | 1421510 - 1421881 | 13895.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
