Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative endonuclease | SAMN04488090_1065 | Not Available | Positive | 1393313 - 1393639 | 12484.7 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN04488090_1066 | Not Available | Negative | 1393879 - 1394499 | 23416.2 |
| protein of unknown function | SAMN04488090_1067 | Not Available | Negative | 1394492 - 1395013 | 19565.7 |
| heparinase ii/iii-like protein | SAMN04488090_1068 | Not Available | Negative | 1395127 - 1397058 | 72937.9 |
| protein of unknown function | SAMN04488090_1069 | Not Available | Negative | 1397064 - 1398200 | 42961.1 |
| protein of unknown function | SAMN04488090_1070 | Not Available | Positive | 1398316 - 1399566 | 47396.8 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN04488090_1071 | Not Available | Negative | 1399560 - 1400420 | 32436.8 |
| protein of unknown function | SAMN04488090_1072 | Not Available | Negative | 1400469 - 1400882 | 15052.2 |
| tetratricopeptide repeat-containing protein | SAMN04488090_1073 | Not Available | Positive | 1401255 - 1402664 | 55570.1 |
| heptosyltransferase-2 | SAMN04488090_1074 | Not Available | Negative | 1402692 - 1403675 | 36437.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
