Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase / selenocysteine lyase | SAMN04488090_1055 | Not Available | Positive | 1383371 - 1384609 | 45248.3 |
| cysteine desulfuration protein sufe | SAMN04488090_1056 | Not Available | Positive | 1384627 - 1385052 | 15998.3 |
| fes assembly suf system protein | SAMN04488090_1057 | Not Available | Positive | 1385080 - 1385391 | 11416.8 |
| putative bacilliredoxin, yphp/yqiw family | SAMN04488090_1058 | Not Available | Positive | 1385421 - 1385855 | 16037.2 |
| penicillin-binding protein 1a | SAMN04488090_1059 | Not Available | Positive | 1386009 - 1388636 | 99533.4 |
| coproporphyrinogen oxidase | SAMN04488090_1060 | Not Available | Positive | 1388642 - 1389538 | 33720.3 |
| hypothetical protein | SAMN04488090_1061 | Not Available | Positive | 1389541 - 1389957 | 16255.5 |
| hypothetical protein | SAMN04488090_1062 | Not Available | Negative | 1389954 - 1390877 | 34713.9 |
| hypothetical protein | SAMN04488090_1063 | Not Available | Negative | 1391007 - 1392200 | 44323.9 |
| activator of hsp90 atpase homolog 1-like protein | SAMN04488090_1064 | Not Available | Positive | 1392327 - 1392830 | 19097.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
